Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | RPYSC3_RS04960 | Not Available | Negative | 1061683 - 1063107 | 49995.4 |
| tlya family rna methyltransferase | RPYSC3_RS04965 | Not Available | Negative | 1063170 - 1063910 | 26030.5 |
| nucleoside 2-deoxyribosyltransferase | RPYSC3_RS04970 | Not Available | Negative | 1063913 - 1064476 | 20229.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | RPYSC3_RS04975 | Not Available | Negative | 1064548 - 1066473 | 68831.7 |
| exodeoxyribonuclease vii small subunit | RPYSC3_RS04980 | Not Available | Negative | 1066886 - 1067137 | 9243.93 |
| histone deacetylase family protein | RPYSC3_RS04985 | Not Available | Negative | 1067220 - 1068149 | 33237.3 |
| bifunctional metallophosphatase/5'-nucleotidase | RPYSC3_RS04990 | Not Available | Negative | 1068313 - 1069995 | 58496.1 |
| hypothetical protein | RPYSC3_RS24925 | Not Available | Positive | 1069998 - 1070216 | 7541.79 |
| hypothetical protein | RPYSC3_RS04995 | Not Available | Positive | 1070213 - 1070689 | 16966.4 |
| crotonase/enoyl-coa hydratase family protein | RPYSC3_RS05000 | Not Available | Negative | 1070732 - 1071493 | 27613.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
