Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | RPYSC3_RS04910 | Not Available | Negative | 1052099 - 1052758 | 22616.9 |
| class i fructose-bisphosphate aldolase | RPYSC3_RS04915 | Not Available | Negative | 1052764 - 1053798 | 37251.8 |
| type ii toxin-antitoxin system pemk/mazf family toxin | RPYSC3_RS04920 | Not Available | Negative | 1053853 - 1054176 | 11625.3 |
| antitoxin maze family protein | RPYSC3_RS04925 | Not Available | Negative | 1054173 - 1054454 | 10663.6 |
| phosphoglycerate kinase | RPYSC3_RS04930 | Not Available | Negative | 1054553 - 1055749 | 42001.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | RPYSC3_RS04935 | Not Available | Negative | 1055971 - 1056978 | 35954.3 |
| transketolase | RPYSC3_RS04940 | Not Available | Negative | 1057194 - 1059179 | 70294.8 |
| duf4164 domain-containing protein | RPYSC3_RS04945 | Not Available | Positive | 1059508 - 1059852 | 12350.3 |
| cell division protein zapa | RPYSC3_RS04950 | Not Available | Positive | 1059849 - 1060259 | 14463.2 |
| class i sam-dependent rna methyltransferase | RPYSC3_RS04955 | Not Available | Negative | 1060398 - 1061636 | 44070.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
