Ketogulonicigenium robustum strain SPU_B003

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ketogulonicigenium

Description

Ketogulonicigenium robustum strain SPU_B003 is a notable bacterium characterized by its possession of three distinct replicons. This trait contributes to its genetic diversity and adaptability. The strain is cataloged under several accession numbers, specifically NZ_CP019937.1, NZ_CP019938.1, and NZ_CP019941.1, which correspond to its genomic sequences available in public databases. As a member of the genus Ketogulonicigenium, K. robustum is recognized for its metabolic capabilities, particularly its potential in the biodegradation of various compounds. The presence of multiple replicons may enhance its ability to adapt to diverse environmental conditions, allowing it to thrive in various ecological niches. The ecological implications of K. robustum strain SPU_B003 are significant, as its metabolic versatility suggests a role in biogeochemical cycles, especially those involving organic compounds. This versatility indicates that it may contribute to carbon cycling within its habitat, potentially aiding in the breakdown of complex organic materials. Thus, understanding the genetic makeup and metabolic pathways of K. robustum can provide insights into its ecological functions and potential applications in biotechnology, particularly in waste management and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusKetogulonicigenium
SpeciesKetogulonicigenium robustum
Strainstrain SPU_B003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

202 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-dependent hydrolaseBVG79_RS10380Not AvailableNegative2086620 - 208732124660.7
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcBVG79_RS10385Not AvailablePositive2087449 - 208773610309.4
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataBVG79_RS10390Not AvailablePositive2087733 - 208921752068.9
excalibur calcium-binding domain-containing proteinBVG79_RS10395Not AvailablePositive2089259 - 208986120801.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive2089908 - 2090311Not Available
50s ribosomal protein l33BVG79_RS10405Not AvailablePositive2090438 - 20906056340.84
res domain-containing proteinBVG79_RS10410Not AvailableNegative2090667 - 209119719075.8
duf2244 domain-containing proteinBVG79_RS10415Not AvailableNegative2091197 - 209172120139.6
cytochrome c oxidase subunit iBVG79_RS10420Not AvailableNegative2091740 - 209341662026.4
d-alanyl-d-alanine carboxypeptidase family proteinBVG79_RS10425Not AvailablePositive2093714 - 209490142135.4

Displaying genes 2301 – 2310 of 2669 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.