Ketogulonicigenium robustum strain SPU_B003

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ketogulonicigenium

Description

Ketogulonicigenium robustum strain SPU_B003 is a notable bacterium characterized by its possession of three distinct replicons. This trait contributes to its genetic diversity and adaptability. The strain is cataloged under several accession numbers, specifically NZ_CP019937.1, NZ_CP019938.1, and NZ_CP019941.1, which correspond to its genomic sequences available in public databases. As a member of the genus Ketogulonicigenium, K. robustum is recognized for its metabolic capabilities, particularly its potential in the biodegradation of various compounds. The presence of multiple replicons may enhance its ability to adapt to diverse environmental conditions, allowing it to thrive in various ecological niches. The ecological implications of K. robustum strain SPU_B003 are significant, as its metabolic versatility suggests a role in biogeochemical cycles, especially those involving organic compounds. This versatility indicates that it may contribute to carbon cycling within its habitat, potentially aiding in the breakdown of complex organic materials. Thus, understanding the genetic makeup and metabolic pathways of K. robustum can provide insights into its ecological functions and potential applications in biotechnology, particularly in waste management and bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusKetogulonicigenium
SpeciesKetogulonicigenium robustum
Strainstrain SPU_B003

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ketogulonicigenium robustum strain SPU_B003 plasmid unnamed1,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

202 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m20/m25/m40 family metallo-hydrolaseBVG79_RS04810Not AvailableNegative946243 - 94763750165.5
5-aminolevulinate synthaseBVG79_RS04815Not AvailablePositive947882 - 94910544295.0
helix-turn-helix domain-containing proteinBVG79_RS04820Not AvailablePositive949215 - 95045043549.1
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseBVG79_RS04825Not AvailablePositive950537 - 95165840234.5
dsba family proteinBVG79_RS04830Not AvailableNegative951659 - 95242027629.8
pyridoxal phosphate-dependent aminotransferaseBVG79_RS04835Not AvailablePositive952584 - 95374141616.8
n-acetylmuramoyl-l-alanine amidaseBVG79_RS04840Not AvailablePositive953741 - 95494342460.0
aldehyde dehydrogenase family proteinBVG79_RS04845Not AvailablePositive955068 - 95758091806.4
peptide chain release factor 2BVG79_RS04850Not AvailablePositive957630 - 95875741655.5
Trna-serNot AvailableNot AvailablePositive958826 - 958915Not Available

Displaying genes 1221 – 1230 of 2669 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.