Shigella sonnei strain 75/02

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sonnei strain 75/02 is a Gram-negative, rod-shaped bacterium that is categorized as a chemoorganotroph, utilizing organic compounds for energy. It is a facultative anaerobe, capable of surviving in both aerobic and anaerobic environments. This strain exhibits a cell arrangement that can be found in pairs or singles and is notable for its lack of mobility, despite possessing flagella. The optimal growth temperature for S. sonnei strain 75/02 is 37°C, placing it within the mesophilic temperature range. This bacterium has a complex genetic structure with five replicons and is characterized by a double-membrane system, which is typical of Gram-negative bacteria. S. sonnei strain 75/02 is primarily associated with Homo sapiens, but it can also infect other metazoans and members of the family Pteropodidae. It is known to cause various health effects, including diarrheal diseases such as shigellosis, enterocolitis, and dysentery. These health impacts underscore its significance as a pathogen in human populations. From an ecological perspective, S. sonnei strain 75/02 demonstrates a free-living biotic relationship, indicating that it can exist independently in its host-associated habitat. The presence of this strain in human environments highlights its role in the transmission of disease, emphasizing the importance of monitoring and controlling outbreaks to prevent public health crises. Accession numbers NZ_CP019692.1, NZ_CP019693.1, NZ_CP019694.1, NZ_CP019696.1, and NZ_CP019689.1 provide genetic information for further research and study of this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sonnei
Strainstrain 75/02

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella sonnei strain 75/02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Pteropodidae
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella sonnei strain 75/02 plasmid p75-02_5, complete sequence.

Gene Summary

Adenine Count

1326 bp

Thymine Count

1417 bp

Guanine Count

1244 bp

Cytosine Count

1127 bp

Genome Length

5114 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinBZ172_RS15365Not AvailablePositive2853429 - 285435534649.2
abc transporter permeaseBZ172_RS15370Not AvailablePositive2854352 - 285512228517.9
pts sugar transporter subunit iiaBZ172_RS15375Not AvailablePositive2855227 - 285566716527.0
polysaccharide deacetylase family proteinBZ172_RS15380Not AvailablePositive2855731 - 285696046313.8
aspartate 1-decarboxylaseBZ172_RS15385Not AvailableNegative2856964 - 285734413834.5
recombination-promoting nuclease rpncBZ172_RS15395Not AvailablePositive2857618 - 285851434587.7
pantoate--beta-alanine ligaseBZ172_RS15400Not AvailableNegative2858806 - 285965731551.5
3-methyl-2-oxobutanoate hydroxymethyltransferaseBZ172_RS15405Not AvailableNegative2859669 - 286046328153.0
is3-like element is2 family transposaseBZ172_RS15410Not AvailableNegative2860576 - 286105216748.6
is1-like element is1a family transposaseBZ172_RS15420Not AvailablePositive2861103 - 286180026455.2

Displaying genes 3201 – 3210 of 5262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC2600399
ShigellosisCausesPMC5177732
Diarrheal diseaseCausesPMC5177732
ShigellosisCausesPMC6038740
ShigellosisCausesPMC2271788
ShigellosisCausesPMC5447701
Bacterial dysenteryCausesPMC5447701
DiarrheaCausesPMC8886675
DysenteryCausesPMC8886675
ShigellosisCausesPMC8886675

Displaying health effects 1 – 10 of 11 in total