Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Oceanicoccus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Oceanicoccus |
| Species | Oceanicoccus sagamiensis |
| Strain | strain NBRC 107125 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167821 bp
Thymine Count
1170864 bp
Guanine Count
1069951 bp
Cytosine Count
1063443 bp
Genome Length
4472079 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | BST96_RS03690 | Not Available | Negative | 829011 - 829625 | 22240.9 |
| heat-inducible transcriptional repressor hrca | BST96_RS03695 | Not Available | Negative | 829781 - 830824 | 38101.6 |
| pyridoxamine 5'-phosphate oxidase family protein | BST96_RS03700 | Not Available | Positive | 830986 - 831543 | 21017.3 |
| dna repair protein recn | BST96_RS03705 | Not Available | Positive | 831876 - 833537 | 60473.8 |
| ferric iron uptake transcriptional regulator | BST96_RS03710 | Not Available | Negative | 833734 - 834147 | 15673.6 |
| outer membrane protein assembly factor bame | BST96_RS03715 | Not Available | Positive | 834220 - 834624 | 15122.0 |
| rnfh family protein | BST96_RS03720 | Not Available | Negative | 834637 - 834945 | 10971.4 |
| type ii toxin-antitoxin system rata family toxin | BST96_RS03725 | Not Available | Negative | 834972 - 835421 | 16523.7 |
| sodium-dependent transporter | BST96_RS03730 | Not Available | Negative | 835437 - 836816 | 50182.7 |
| ssra-binding protein smpb | BST96_RS03735 | Not Available | Positive | 836902 - 837378 | 18333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
