Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Oceanicoccus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Oceanicoccus |
| Species | Oceanicoccus sagamiensis |
| Strain | strain NBRC 107125 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167821 bp
Thymine Count
1170864 bp
Guanine Count
1069951 bp
Cytosine Count
1063443 bp
Genome Length
4472079 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilw family protein | BST96_RS01205 | Not Available | Positive | 279957 - 280778 | 30472.4 |
| pilx n-terminal domain-containing pilus assembly protein | BST96_RS01210 | Not Available | Positive | 280789 - 281274 | 17585.2 |
| pilus assembly protein | BST96_RS01215 | Not Available | Positive | 281305 - 284013 | 100754.0 |
| type iv pilin protein | BST96_RS01220 | Not Available | Positive | 284006 - 284449 | 15881.8 |
| helix-turn-helix domain-containing protein | BST96_RS01225 | Not Available | Negative | 284655 - 284954 | 10922.4 |
| type ii toxin-antitoxin system rele/pare family toxin | BST96_RS01230 | Not Available | Negative | 284923 - 285276 | 13115.1 |
| alanine racemase | BST96_RS01235 | Not Available | Negative | 285357 - 286436 | 38877.5 |
| d-amino acid aminotransferase | BST96_RS01240 | Not Available | Negative | 286450 - 287307 | 31776.5 |
| glutamate cyclase domain-containing protein | BST96_RS01245 | Not Available | Negative | 287336 - 288190 | 30402.6 |
| biotin-dependent carboxyltransferase family protein | BST96_RS01250 | Not Available | Negative | 288202 - 289164 | 34153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
