Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Oceanicoccus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Oceanicoccus |
| Species | Oceanicoccus sagamiensis |
| Strain | strain NBRC 107125 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167821 bp
Thymine Count
1170864 bp
Guanine Count
1069951 bp
Cytosine Count
1063443 bp
Genome Length
4472079 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | BST96_RS01105 | Not Available | Positive | 257114 - 258472 | 49846.6 |
| type iv pilin protein | BST96_RS01110 | Not Available | Negative | 258476 - 258943 | 16444.3 |
| vwa domain-containing protein | BST96_RS01115 | Not Available | Negative | 258963 - 262280 | 118891.0 |
| pilx n-terminal domain-containing pilus assembly protein | BST96_RS01120 | Not Available | Negative | 262280 - 262771 | 17637.0 |
| pilw family protein | BST96_RS01125 | Not Available | Negative | 262794 - 263870 | 39182.0 |
| type iv pilus modification protein pilv | BST96_RS01130 | Not Available | Negative | 263870 - 264382 | 18100.5 |
| gsph/fimt family pseudopilin | BST96_RS01135 | Not Available | Negative | 264382 - 265014 | 22711.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BST96_RS01140 | Not Available | Negative | 265187 - 266134 | 34243.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | BST96_RS01145 | Not Available | Negative | 266178 - 266627 | 15925.5 |
| signal peptidase ii | BST96_RS01150 | Not Available | Negative | 266655 - 267158 | 18244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
