Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Oceanicoccus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Oceanicoccus |
| Species | Oceanicoccus sagamiensis |
| Strain | strain NBRC 107125 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167821 bp
Thymine Count
1170864 bp
Guanine Count
1069951 bp
Cytosine Count
1063443 bp
Genome Length
4472079 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | BST96_RS00605 | Not Available | Negative | 146381 - 147607 | 46398.7 |
| dna mismatch repair protein muts | BST96_RS00610 | Not Available | Positive | 147867 - 150476 | 96098.7 |
| ferredoxin fdxa | BST96_RS00615 | Not Available | Positive | 150572 - 150895 | 12141.3 |
| rna polymerase sigma factor rpos | BST96_RS00620 | Not Available | Negative | 151093 - 152220 | 42285.8 |
| peptidoglycan dd-metalloendopeptidase family protein | BST96_RS00625 | Not Available | Negative | 152427 - 153212 | 28266.1 |
| duf368 domain-containing protein | BST96_RS00630 | Not Available | Negative | 153425 - 154381 | 34448.0 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | BST96_RS00635 | Not Available | Negative | 154390 - 155055 | 24580.7 |
| trna pseudouridine(13) synthase trud | BST96_RS00640 | Not Available | Negative | 155156 - 156196 | 39166.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BST96_RS00645 | Not Available | Negative | 156196 - 156669 | 16848.2 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BST96_RS00650 | Not Available | Negative | 156672 - 157379 | 25515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
