Polaribacter sp. SA4-12

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. SA4-12 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number NZ_CP019334.1, which provides a reference for its genetic information in scientific databases. As a member of the genus Polaribacter, this bacterium is likely adapted to cold environments, as many members of this genus are isolated from polar or cold marine habitats. These adaptations may include specific metabolic pathways that enable survival in low-temperature conditions, although specific metabolic capabilities of Polaribacter sp. SA4-12 are not detailed here. The ecological significance of Polaribacter sp. SA4-12 may relate to its role in nutrient cycling within its environment. Bacteria such as those in the Polaribacter genus are known to participate in the degradation of organic matter in marine ecosystems, which can contribute to the overall health and nutrient dynamics of these habitats. Understanding the traits and ecological roles of Polaribacter sp. SA4-12 can enhance our comprehension of microbial diversity and its implications for marine ecology, particularly in polar regions where climate change is impacting biodiversity and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp. SA4-12
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. SA4-12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. SA4-12 chromosome.

Gene Summary

Adenine Count

1403942 bp

Thymine Count

1400408 bp

Guanine Count

589650 bp

Cytosine Count

596161 bp

Genome Length

3990261 bp

Protein-coding Genes

3407 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane beta-barrel proteinBTO07_RS02665Not AvailableNegative578105 - 57900432799.3
llm class flavin-dependent oxidoreductaseBTO07_RS02670Not AvailablePositive579280 - 58028737128.3
winged helix-turn-helix transcriptional regulatorBTO07_RS02675Not AvailableNegative580376 - 58072013024.3
nad(p)h-dependent oxidoreductaseBTO07_RS02680Not AvailablePositive580974 - 58164825887.1
dihydrofolate reductase family proteinBTO07_RS02685Not AvailableNegative581750 - 58228920302.4
efflux rnd transporter periplasmic adaptor subunitBTO07_RS02690Not AvailablePositive582562 - 58378245469.1
abc transporter atp-binding proteinBTO07_RS02695Not AvailablePositive583791 - 58453427598.2
abc transporter permeaseBTO07_RS02700Not AvailablePositive584544 - 58576144202.2
mfs transporterBTO07_RS02705Not AvailablePositive585852 - 58699142529.9
dead/deah box helicaseBTO07_RS02710Not AvailablePositive588040 - 590952110819.0

Displaying genes 531 – 540 of 3467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.