Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum daqingense
Strainstrain JX313

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathighly salinized soil; salinized soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5778 family proteinBB347_RS00355Not AvailablePositive78710 - 7911414979.0
lrp/asnc family transcriptional regulatorBB347_RS00360Not AvailablePositive79155 - 8026441172.5
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelataseBB347_RS00365Not AvailablePositive80368 - 8102423564.7
glutamyl-trna reductaseBB347_RS00370Not AvailablePositive81021 - 8238847626.8
hypothetical proteinBB347_RS00375Not AvailableNegative82523 - 827026861.03
4a-hydroxytetrahydrobiopterin dehydrataseBB347_RS00380Not AvailablePositive82823 - 8310410789.2
lwr-salt proteinBB347_RS00385Not AvailablePositive83109 - 8348614268.4
hypothetical proteinBB347_RS00390Not AvailablePositive83596 - 8395212861.4
hypothetical proteinBB347_RS00395Not AvailablePositive84023 - 8433110581.1
alpha/beta fold hydrolaseBB347_RS00400Not AvailablePositive84477 - 8527428940.2

Displaying genes 461 – 470 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.