Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
bacterio-opsin activator domain-containing protein	BB347_RS17305	Not Available	Negative	182883 - 184976	78380.0
tyrosine-type recombinase/integrase	BB347_RS17310	Not Available	Positive	185271 - 186404	41913.4
na(+)/h(+) antiporter subunit d	BB347_RS17315	Not Available	Negative	186554 - 188410	65910.1
proton-conducting transporter membrane subunit	BB347_RS17320	Not Available	Negative	188407 - 190401	70714.5
proton-conducting transporter membrane subunit	BB347_RS17325	Not Available	Negative	190398 - 191969	54176.6
cation:proton antiporter subunit c	BB347_RS17330	Not Available	Negative	191962 - 192345	13680.1
mnhb domain-containing protein	BB347_RS17335	Not Available	Negative	192338 - 192844	17702.2
duf4040 domain-containing protein	BB347_RS17340	Not Available	Negative	192844 - 193392	19366.9
monovalent cation/h(+) antiporter subunit g	BB347_RS17345	Not Available	Negative	193389 - 193721	11818.3
cation:proton antiporter	BB347_RS17350	Not Available	Negative	193718 - 194005	10154.9

Displaying genes 371 – 380 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.