Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
gtp-dependent dephospho-coa kinase family protein	BB347_RS15935	Not Available	Negative	3294576 - 3295154	20816.1
transcription elongation factor subunit spt4	BB347_RS15940	Not Available	Negative	3295161 - 3295358	7203.23
dna-directed rna polymerase	BB347_RS15945	Not Available	Negative	3295361 - 3295933	20862.3
pin domain-containing protein	BB347_RS15950	Not Available	Negative	3295934 - 3296326	14285.0
translation initiation factor if-2 subunit gamma	BB347_RS15955	Not Available	Negative	3296349 - 3297581	43320.7
hypothetical protein	BB347_RS15960	Not Available	Negative	3297841 - 3298068	8649.81
phosphate signaling complex protein phou	BB347_RS15965	Not Available	Negative	3298076 - 3298759	25513.9
phosphate abc transporter atp-binding protein pstb	BB347_RS15970	Not Available	Negative	3298763 - 3299590	30445.7
phosphate abc transporter permease psta	BB347_RS15975	Not Available	Negative	3299592 - 3300509	32869.4
phosphate abc transporter permease subunit pstc	BB347_RS15980	Not Available	Negative	3300506 - 3301516	36242.1

Displaying genes 3611 – 3620 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.