Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
nad(p)/fad-dependent oxidoreductase	BB347_RS15400	Not Available	Negative	3184784 - 3185581	28684.1
dipeptide abc transporter atp-binding protein	BB347_RS15405	Not Available	Negative	3185578 - 3187584	71824.2
nickel transporter permease	BB347_RS15410	Not Available	Negative	3187577 - 3188488	31952.4
nickel abc transporter permease	BB347_RS15415	Not Available	Negative	3188485 - 3189462	34185.8
abc transporter substrate-binding protein	BB347_RS15420	Not Available	Negative	3189473 - 3190999	55673.2
molybdenum cofactor biosynthesis protein b	BB347_RS15425	Not Available	Negative	3191270 - 3191863	21196.3
cobw family gtp-binding protein	BB347_RS15430	Not Available	Negative	3191945 - 3193249	47815.3
cobw family gtp-binding protein	BB347_RS15435	Not Available	Negative	3193250 - 3194455	44770.1
copg family ribbon-helix-helix protein	BB347_RS15440	Not Available	Positive	3194565 - 3194987	15537.0
Trna-asn	Not Available	Not Available	Positive	3195744 - 3195816	Not Available

Displaying genes 3501 – 3510 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.