Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum daqingense
Strainstrain JX313

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathighly salinized soil; salinized soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaBB347_RS13030Not AvailableNegative2674899 - 267591237109.7
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaBB347_RS13035Not AvailableNegative2675914 - 267704742455.2
lipoyl synthaseBB347_RS13040Not AvailableNegative2677392 - 267836336022.1
ph domain-containing proteinBB347_RS13045Not AvailablePositive2678631 - 267914618573.1
hypothetical proteinBB347_RS13050Not AvailablePositive2679266 - 267986219877.8
dead/deah box helicaseBB347_RS13055Not AvailablePositive2679965 - 268232886281.0
bacteriophage holinBB347_RS13060Not AvailablePositive2682482 - 268280211510.6
had family hydrolaseBB347_RS13065Not AvailableNegative2682847 - 268349724329.5
caib/baif coa transferase family proteinBB347_RS13070Not AvailablePositive2683746 - 268496045037.7
tetr/acrr family transcriptional regulatorBB347_RS13075Not AvailableNegative2685064 - 268567823466.2

Displaying genes 3021 – 3030 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.