Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum daqingense
Strainstrain JX313

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathighly salinized soil; salinized soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l31eBB347_RS12835Not AvailableNegative2640452 - 264073010309.1
50s ribosomal protein l39eBB347_RS12840Not AvailableNegative2640733 - 26408856086.44
rna 2',3'-cyclic phosphodiesteraseBB347_RS12845Not AvailableNegative2641089 - 264164620230.5
hypothetical proteinBB347_RS12850Not AvailableNegative2641711 - 264221718275.6
abc transporter permease subunitBB347_RS12855Not AvailableNegative2642527 - 264334229443.3
abc transporter permease subunitBB347_RS12860Not AvailableNegative2643377 - 264419829227.8
atp-binding cassette domain-containing proteinBB347_RS12865Not AvailableNegative2644198 - 264511232987.8
tetratricopeptide repeat proteinBB347_RS12870Not AvailablePositive2645299 - 264619833288.3
duf424 domain-containing proteinBB347_RS12875Not AvailablePositive2646202 - 264649210282.8
abc transporter permeaseBB347_RS12880Not AvailableNegative2646521 - 264739631390.7

Displaying genes 2981 – 2990 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.