Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
is6 family transposase	BB347_RS11875	Not Available	Negative	2448062 - 2448736	25646.3
duf5810 domain-containing protein	BB347_RS11880	Not Available	Positive	2448892 - 2449341	16142.8
duf5809 family protein	BB347_RS11885	Not Available	Positive	2449367 - 2449777	15248.5
nudix hydrolase	BB347_RS11890	Not Available	Positive	2449890 - 2450489	22044.3
histidine kinase n-terminal 7tm domain-containing protein	BB347_RS11895	Not Available	Positive	2450718 - 2451440	25487.1
rhodanese-like domain-containing protein	BB347_RS11900	Not Available	Positive	2451545 - 2451910	13578.4
stress response translation initiation inhibitor ycih	BB347_RS11905	Not Available	Negative	2452060 - 2452353	10740.6
duf3488 and duf4129 domain-containing transglutaminase family protein	BB347_RS11910	Not Available	Negative	2452450 - 2454792	83341.8
duf58 domain-containing protein	BB347_RS11915	Not Available	Negative	2454789 - 2455901	39931.4
aaa family atpase	BB347_RS11920	Not Available	Negative	2455904 - 2456878	35336.6

Displaying genes 2791 – 2800 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.