Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum daqingense
Strainstrain JX313

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathighly salinized soil; salinized soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-hydroxyacyl-coa dehydrogenase family proteinBB347_RS11320Not AvailableNegative2329393 - 233027731996.7
metallophosphoesteraseBB347_RS11325Not AvailablePositive2330499 - 233185750947.2
thiolase family proteinBB347_RS11330Not AvailablePositive2331978 - 233312040289.8
acyl-coa dehydrogenase family proteinBB347_RS11335Not AvailableNegative2333229 - 233436841383.3
long-chain-fatty-acid--coa ligaseBB347_RS11340Not AvailableNegative2334680 - 233625157562.8
trap transporter permeaseBB347_RS11345Not AvailableNegative2336344 - 233850676802.1
taxi family trap transporter solute-binding subunitBB347_RS11350Not AvailableNegative2338506 - 233956439047.5
acyl-coa dehydrogenase family proteinBB347_RS11355Not AvailablePositive2339761 - 234092442840.3
iclr family transcriptional regulatorBB347_RS11360Not AvailablePositive2341155 - 234191328068.8
rod-determining factor rdfaBB347_RS11365Not AvailablePositive2342021 - 234263823300.1

Displaying genes 2681 – 2690 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.