Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum daqingense
Strainstrain JX313

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathighly salinized soil; salinized soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorBB347_RS10875Not AvailablePositive2241472 - 224210123875.2
atp-binding proteinBB347_RS10880Not AvailablePositive2242338 - 224419767816.4
cap domain-containing proteinBB347_RS10885Not AvailableNegative2244223 - 224514032841.7
cap domain-containing proteinBB347_RS10890Not AvailableNegative2245598 - 224618221364.9
alpha/beta hydrolaseBB347_RS10895Not AvailableNegative2246586 - 224721822648.1
m23 family metallopeptidaseBB347_RS10900Not AvailableNegative2247245 - 224881056478.1
winged helix-turn-helix domain-containing proteinBB347_RS10905Not AvailablePositive2248933 - 224980231933.0
pspa/im30 family proteinBB347_RS10910Not AvailablePositive2249977 - 225081631784.0
hypothetical proteinBB347_RS10915Not AvailablePositive2251012 - 225135612548.5
fxlyd domain-containing proteinBB347_RS10920Not AvailableNegative2251452 - 225195217886.4

Displaying genes 2591 – 2600 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.