Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	BB347_RS10095	Not Available	Positive	2079182 - 2079475	11613.3
ribonuclease catalytic domain-containing protein	BB347_RS10100	Not Available	Positive	2079627 - 2080925	49664.6
gnat family n-acetyltransferase	BB347_RS10105	Not Available	Negative	2080945 - 2081496	20562.6
bifunctional 2-dehydro-3-deoxygluconokinase/2-dehydro-3- deoxygalactonokinase	BB347_RS10110	Not Available	Negative	2081613 - 2082566	34347.9
rna 3'-terminal phosphate cyclase	BB347_RS10115	Not Available	Negative	2082801 - 2083976	41412.1
mfs transporter	BB347_RS10120	Not Available	Positive	2084100 - 2085416	46488.9
hypothetical protein	BB347_RS10125	Not Available	Negative	2085437 - 2085646	7219.89
dna mismatch repair endonuclease mutl	BB347_RS10130	Not Available	Negative	2085765 - 2087954	77345.0
dihydrodipicolinate synthase family protein	BB347_RS10135	Not Available	Negative	2088154 - 2089050	31236.4
sdr family nad(p)-dependent oxidoreductase	BB347_RS10140	Not Available	Negative	2089248 - 2090045	27734.3

Displaying genes 2431 – 2440 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.