Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
phosphotransferase family protein	BB347_RS09115	Not Available	Positive	1865948 - 1867009	40927.5
shoct domain-containing protein	BB347_RS09120	Not Available	Positive	1867052 - 1867588	20459.2
trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3	BB347_RS09125	Not Available	Positive	1867983 - 1869644	63360.1
duf411 domain-containing protein	BB347_RS09130	Not Available	Positive	1869794 - 1870291	17809.0
3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein	BB347_RS09135	Not Available	Positive	1870454 - 1872412	70901.9
paai family thioesterase	BB347_RS09140	Not Available	Positive	1872416 - 1872871	16418.7
winged helix-turn-helix domain-containing protein	BB347_RS09145	Not Available	Negative	1872882 - 1873397	20395.7
atp-dependent helicase	BB347_RS09150	Not Available	Negative	1873695 - 1876544	106622.0
hypothetical protein	BB347_RS09155	Not Available	Negative	1876743 - 1876997	8560.66
zinc-dependent alcohol dehydrogenase family protein	BB347_RS09160	Not Available	Negative	1877076 - 1878161	38058.7

Displaying genes 2231 – 2240 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.