Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatronorubrum
SpeciesNatronorubrum daqingense
Strainstrain JX313

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathighly salinized soil; salinized soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycerol geranylgeranyltransferaseBB347_RS08760Not AvailableNegative1784283 - 178498725256.8
branched-chain amino acid transaminaseBB347_RS08765Not AvailableNegative1785072 - 178600134655.1
fixh family proteinBB347_RS08770Not AvailableNegative1786113 - 178825173901.2
hypothetical proteinBB347_RS08775Not AvailableNegative1788255 - 178949644703.5
winged helix-turn-helix transcriptional regulatorBB347_RS08780Not AvailableNegative1789621 - 179013920054.6
hypothetical proteinBB347_RS08785Not AvailablePositive1790352 - 179077114930.1
3,4-dihydroxy-2-butanone-4-phosphate synthaseBB347_RS08790Not AvailableNegative1790826 - 179153925146.7
duf120 domain-containing proteinBB347_RS08795Not AvailableNegative1791536 - 179224326258.1
4-demethylwyosine synthase tyw1BB347_RS08800Not AvailableNegative1792478 - 179350338745.9
hypothetical proteinBB347_RS08805Not AvailableNegative1793601 - 179389110214.3

Displaying genes 2161 – 2170 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.