Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
pqq-binding-like beta-propeller repeat protein	BB347_RS08360	Not Available	Negative	1709905 - 1711098	42531.6
hemk2/mtq2 family protein methyltransferase	BB347_RS08365	Not Available	Negative	1711148 - 1711726	20496.7
mechanosensitive ion channel domain-containing protein	BB347_RS08370	Not Available	Negative	1711726 - 1713042	47247.3
16s ribosomal rna methyltransferase a	BB347_RS08375	Not Available	Negative	1713161 - 1714012	31191.5
duf655 domain-containing protein	BB347_RS08380	Not Available	Negative	1714090 - 1714671	21960.3
acyl-coa dehydrogenase family protein	BB347_RS08385	Not Available	Positive	1714872 - 1716017	41803.5
rna polymerase rpb4 family protein	BB347_RS08390	Not Available	Negative	1716097 - 1716453	13720.9
50s ribosomal protein l21e	BB347_RS08395	Not Available	Negative	1716461 - 1716769	11445.5
hypothetical protein	BB347_RS08400	Not Available	Negative	1716909 - 1717904	37132.1
mbl fold metallo-hydrolase	BB347_RS08405	Not Available	Positive	1718043 - 1718741	24767.1

Displaying genes 2081 – 2090 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.