Natronorubrum daqingense strain JX313

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natronorubrum

Description

Natronorubrum daqingense strain JX313 is characterized by having three distinct replicons. The strain's genomic information is accessible through the following GenBank accessions: NZ_CP019327.1, NZ_CP019328.1, and NZ_CP019329.1. This halophilic archaeon is known for its unique adaptation to extreme saline environments, which contributes to its ecological niche. The presence of multiple replicons may suggest a complex regulation of its genomic functions, potentially allowing for enhanced metabolic flexibility and adaptation to variable conditions in its natural habitat. Understanding the genomic architecture of Natronorubrum daqingense strain JX313 can provide insights into the evolutionary mechanisms that enable life in hypersaline environments. The strain's ability to thrive in such conditions underscores the diverse strategies employed by extremophiles in microbial ecology.

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Halobacteria
Order	Halobacteriales
Family	Natrialbaceae
Genus	Natronorubrum
Species	Natronorubrum daqingense
Strain	strain JX313

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	highly salinized soil; salinized soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Natronorubrum daqingense strain JX313 plasmid unnamed2, complete

NZ_CP019329.1 NZ_CP019328.1 NZ_CP019327.1

Gene Summary

Adenine Count

39350 bp

Thymine Count

40269 bp

Guanine Count

50798 bp

Cytosine Count

50418 bp

Genome Length

180835 bp

Protein-coding Genes

201 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
carbohydrate abc transporter permease	BB347_RS07095	Not Available	Positive	1449565 - 1450464	33648.6
abc transporter atp-binding protein	BB347_RS07100	Not Available	Positive	1450530 - 1451606	39579.5
abc transporter substrate-binding protein	BB347_RS07105	Not Available	Positive	1451697 - 1453076	51058.0
rdd family protein	BB347_RS07110	Not Available	Negative	1453070 - 1453615	19921.3
apc family permease	BB347_RS07115	Not Available	Negative	1453731 - 1455212	53913.8
acyl-coa dehydrogenase family protein	BB347_RS07120	Not Available	Negative	1455610 - 1456797	44048.8
mth865 family protein	BB347_RS07125	Not Available	Negative	1456962 - 1457234	9680.87
acetyl-coa acetyltransferase	BB347_RS07130	Not Available	Positive	1457478 - 1458626	39968.6
zn-ribbon domain-containing ob-fold protein	BB347_RS07135	Not Available	Positive	1458623 - 1459063	15772.3
maoc family dehydratase n-terminal domain-containing protein	BB347_RS07140	Not Available	Negative	1459179 - 1460165	35639.4

Displaying genes 1821 – 1830 of 3714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.