Methylorubrum extorquens strain PSBB040

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum extorquens strain PSBB040 is a facultative aerobic, Gram-negative methylotroph characterized by its rod shape and mobility, facilitated by the presence of flagella. This strain is capable of utilizing methanol and other one-carbon compounds as its primary energy source, indicative of its role in carbon cycling in various habitats. The organism exhibits a unique cell arrangement, occurring in pairs and singles, which may influence its ecological interactions and adaptability. Methylorubrum extorquens PSBB040 thrives optimally at 25°C, fitting within the mesophilic temperature range, suggesting it is well-suited for environments that maintain moderate temperatures. This strain is free-living and has been associated with hosts in the Viridiplantae group, indicating potential interactions with plant life, possibly contributing to plant nutrient cycling or growth promotion. With a single replicon and a double membrane structure, it follows the typical characteristics of many Gram-negative bacteria, which may have implications for its metabolic processes and environmental resilience. Overall, the ecological significance of Methylorubrum extorquens strain PSBB040 lies in its metabolic capabilities as a methylotroph, allowing it to thrive in a variety of environments while participating in the utilization of one-carbon compounds. This ability not only highlights its role in carbon transformation but also underscores its potential importance in agricultural or natural ecosystems where it may interact with plant hosts. Accessions for this strain include NZ_CP019322.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum extorquens
Strainstrain PSBB040

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum extorquens strain PSBB040
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Metaphire sieboldi
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum extorquens strain PSBB040 chromosome, complete

Gene Summary

Adenine Count

895059 bp

Thymine Count

902048 bp

Guanine Count

1933424 bp

Cytosine Count

1923782 bp

Genome Length

5654313 bp

Protein-coding Genes

5154 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar basal-body rod protein flgfBV511_RS04460Not AvailableNegative942541 - 94326925009.8
duf1217 domain-containing proteinBV511_RS04465Not AvailableNegative943275 - 94451943129.6
hypothetical proteinBV511_RS04470Not AvailableNegative944692 - 94526118962.7
pilz domain-containing proteinBV511_RS04475Not AvailablePositive945464 - 94576310912.2
flagellinBV511_RS27905Not AvailablePositive946286 - 94804358794.6
response regulator transcription factorBV511_RS04485Not AvailableNegative948152 - 94883224992.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeBV511_RS04490Not AvailablePositive949217 - 95049445141.1
atp-dependent dna helicaseBV511_RS04495Not AvailableNegative950645 - 95176641374.3
oxygen-dependent coproporphyrinogen oxidaseBV511_RS04500Not AvailableNegative951814 - 95273734218.1
tonb-dependent siderophore receptorBV511_RS04505Not AvailableNegative952781 - 95496778687.7

Displaying genes 911 – 920 of 5283 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.