Rhodoferax saidenbachensis strain DSM 22694

Gram-negativeRodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax saidenbachensis strain DSM 22694 is a gram-negative, aerobic bacterium characterized by its rod shape and the presence of flagella. This motility feature allows the organism to navigate its environment effectively, which may be advantageous for survival in diverse ecological niches. The strain is noted for having a single replicon, indicating a streamlined genetic organization that could influence its replication and adaptability. The strain is cataloged under accession number NZ_CP019239.1, which provides a reference for its genomic data. The aerobic nature of Rhodoferax saidenbachensis suggests it requires oxygen for growth and metabolism, positioning it within specific environmental contexts where oxygen is readily available. Understanding the traits of Rhodoferax saidenbachensis can contribute to insights into its ecological role, particularly in aerobic systems where it may participate in biogeochemical cycles. Its motility may facilitate interactions with other microorganisms and influence community dynamics in its habitat. Thus, studying this bacterium could provide valuable information regarding microbial behavior and ecosystem functioning in oxygen-rich environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax saidenbachensis
Strainstrain DSM 22694

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax saidenbachensis strain DSM 22694
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax saidenbachensis strain DSM 22694 chromosome, complete

Gene Summary

Adenine Count

835318 bp

Thymine Count

830319 bp

Guanine Count

1298976 bp

Cytosine Count

1300242 bp

Genome Length

4264855 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinRS694_RS00880Not AvailableNegative168306 - 17026771820.2
ggdef domain-containing proteinRS694_RS00885Not AvailableNegative170442 - 17161743803.6
coa-acylating methylmalonate-semialdehyde dehydrogenaseRS694_RS00890Not AvailableNegative171852 - 17335753357.6
aspartate aminotransferase family proteinRS694_RS00895Not AvailableNegative173452 - 17476247022.4
lysr family transcriptional regulatorRS694_RS00900Not AvailablePositive174937 - 17587834421.3
marr family winged helix-turn-helix transcriptional regulatorRS694_RS00905Not AvailableNegative175882 - 17634317018.0
tripartite tricarboxylate transporter substrate-binding proteinRS694_RS00910Not AvailableNegative176386 - 17737234246.2
sdr family nad(p)-dependent oxidoreductaseRS694_RS00915Not AvailableNegative177415 - 17820026701.6
feruloyl-coa synthaseRS694_RS00920Not AvailableNegative178212 - 18008067402.8
crotonase/enoyl-coa hydratase family proteinRS694_RS00925Not AvailableNegative180111 - 18089327913.7

Displaying genes 181 – 190 of 4057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.