Rhodoferax koreense strain DCY-110

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax koreense strain DCY-110 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests it is motile. This motility may play a role in its ecological interactions and habitat colonization. The strain has a single replicon, indicating a streamlined genetic organization, which can be advantageous for efficient replication and adaptation within its environment. The genomic information for Rhodoferax koreense strain DCY-110 is cataloged under the accession number NZ_CP019238.1, allowing for further exploration and study of its genetic makeup and potential applications in various fields such as biotechnology or environmental microbiology. In terms of ecological significance, the motility of Rhodoferax koreense may allow it to thrive in diverse environments, potentially contributing to nutrient cycling and influencing microbial community dynamics. The specific traits of this strain reflect its adaptability and potential roles in the ecosystems it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax koreensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax koreense strain DCY-110
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax koreense strain DCY-110 plasmid unnamed2.

Gene Summary

Adenine Count

13295 bp

Thymine Count

12048 bp

Guanine Count

23052 bp

Cytosine Count

22881 bp

Genome Length

71276 bp

Protein-coding Genes

82 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trai/moba(p) family conjugative relaxaseRD110_RS27200Not AvailablePositive37297 - 3953782125.7
type iv secretory system conjugative dna transfer family proteinRD110_RS27205Not AvailablePositive39534 - 4144769901.1
conjugative transfer signal peptidase trafRD110_RS27210Not AvailablePositive41444 - 4198018847.9
dna topoisomerase iiiRD110_RS27215Not AvailablePositive41992 - 4405574872.9
protein tradRD110_RS27220Not AvailablePositive44077 - 4446613601.3
zincin-like metallopeptidase domain-containing proteinRD110_RS27225Not AvailablePositive44470 - 48816158974.0
tn3-like element is1071 family transposaseRD110_RS27235Not AvailablePositive49107 - 52022108687.0
p-type conjugative transfer protein trblRD110_RS27240Not AvailablePositive52154 - 5275920686.6
is91-like element ispps1 family transposaseRD110_RS27245Not AvailablePositive52868 - 5441556553.9
recombinase family proteinRD110_RS27250Not AvailablePositive54581 - 5524923936.4

Displaying genes 51 – 60 of 82 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.