Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Brevirhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Brevirhabdus |
| Species | Brevirhabdus pacifica |
| Strain | strain DY6-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Pacific Clarion-Clipperton Fracture Zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
526008 bp
Thymine Count
527642 bp
Guanine Count
1068151 bp
Cytosine Count
1061212 bp
Genome Length
3192699 bp
Protein-coding Genes
2945 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone oxidoreductase subunit ndufa12 | BV394_RS03215 | Not Available | Negative | 673876 - 674259 | 14547.1 |
| rida family protein | BV394_RS03220 | Not Available | Negative | 674350 - 674733 | 13572.3 |
| atp-dependent clp protease atp-binding subunit clpx | BV394_RS03225 | Not Available | Negative | 674730 - 675998 | 46028.4 |
| atp-dependent clp protease proteolytic subunit | BV394_RS03230 | Not Available | Negative | 676141 - 676773 | 23407.1 |
| fad-binding domain-containing protein | BV394_RS03235 | Not Available | Positive | 677158 - 678507 | 48734.2 |
| rna polymerase sigma factor rpoh | BV394_RS03240 | Not Available | Negative | 678650 - 679543 | 33994.6 |
| rlua family pseudouridine synthase | BV394_RS03245 | Not Available | Negative | 679760 - 680815 | 37500.2 |
| duf6476 family protein | BV394_RS03250 | Not Available | Positive | 680814 - 681176 | 12210.0 |
| Trna-his | Not Available | Not Available | Positive | 681254 - 681330 | Not Available |
| duf6324 family protein | BV394_RS03260 | Not Available | Positive | 681572 - 681799 | 8025.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
