Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Brevirhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Brevirhabdus |
| Species | Brevirhabdus pacifica |
| Strain | strain DY6-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Pacific Clarion-Clipperton Fracture Zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
526008 bp
Thymine Count
527642 bp
Guanine Count
1068151 bp
Cytosine Count
1061212 bp
Genome Length
3192699 bp
Protein-coding Genes
2945 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome biogenesis protein ccmi | BV394_RS00180 | Not Available | Negative | 39106 - 40386 | 45527.4 |
| sarcosine oxidase subunit beta family protein | BV394_RS00185 | Not Available | Positive | 40712 - 41959 | 44974.1 |
| hypothetical protein | BV394_RS00190 | Not Available | Positive | 42162 - 42491 | 10533.0 |
| hypothetical protein | BV394_RS16810 | Not Available | Positive | 42633 - 42791 | 5107.15 |
| cbb3-type cytochrome c oxidase subunit 3 | BV394_RS16930 | Not Available | Positive | 42906 - 43172 | 9802.65 |
| sarcosine oxidase subunit alpha family protein | BV394_RS00200 | Not Available | Positive | 43373 - 46411 | 109138.0 |
| sarcosine oxidase subunit gamma | BV394_RS00205 | Not Available | Positive | 46404 - 46988 | 20563.7 |
| superoxide dismutase | BV394_RS00210 | Not Available | Positive | 47168 - 47773 | 22398.0 |
| phosphotransferase | BV394_RS00215 | Not Available | Positive | 48018 - 48854 | 30845.7 |
| hint domain-containing protein | BV394_RS00220 | Not Available | Positive | 48856 - 49848 | 36004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
