Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Brevirhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Brevirhabdus |
| Species | Brevirhabdus pacifica |
| Strain | strain DY6-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Pacific Clarion-Clipperton Fracture Zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
526008 bp
Thymine Count
527642 bp
Guanine Count
1068151 bp
Cytosine Count
1061212 bp
Genome Length
3192699 bp
Protein-coding Genes
2945 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | BV394_RS05040 | Not Available | Negative | 1071735 - 1073009 | 44457.9 |
| trap transporter small permease | BV394_RS05045 | Not Available | Negative | 1073013 - 1073540 | 18559.9 |
| dctp family trap transporter solute-binding subunit | BV394_RS05050 | Not Available | Negative | 1073611 - 1074621 | 36125.7 |
| shikimate dehydrogenase | BV394_RS05055 | Not Available | Negative | 1074646 - 1075509 | 30263.7 |
| tetr/acrr family transcriptional regulator | BV394_RS05060 | Not Available | Positive | 1075728 - 1076333 | 22851.2 |
| merr family transcriptional regulator | BV394_RS05065 | Not Available | Positive | 1076424 - 1076852 | 15752.8 |
| siroheme synthase cysg | BV394_RS05070 | Not Available | Negative | 1076846 - 1078270 | 49496.8 |
| glycosyl transferase family protein | BV394_RS05075 | Not Available | Negative | 1078281 - 1079252 | 34162.3 |
| nitrate reductase | BV394_RS05080 | Not Available | Negative | 1079249 - 1081897 | 93091.4 |
| nitrite reductase small subunit nird | BV394_RS05085 | Not Available | Negative | 1081897 - 1082232 | 11776.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
