Rahnella sikkimica strain ERMR1:05

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella sikkimica strain ERMR1:05 is a Gram-negative bacterium characterized by its possession of two replicons. The genomic information for this strain is available under the accessions NZ_CP019062.1 and NZ_CP019064.1. As a member of the genus Rahnella, this strain is likely to exhibit traits common to the group, such as being rod-shaped and possessing the capability to thrive in various environments. The presence of two replicons may indicate a complex genomic organization that can contribute to its adaptability and metabolic versatility. Understanding the genomic structure of Rahnella sikkimica strain ERMR1:05 could provide insights into its ecological roles and potential applications. For instance, the two replicons might facilitate the acquisition of traits beneficial for survival in diverse habitats, including the ability to utilize various substrates or resist environmental stressors. This adaptability can be significant in ecological niches where competition for resources is high. The study of strain ERMR1:05 could also shed light on the evolutionary mechanisms at play within the Rahnella genus. As researchers explore its genetic characteristics and metabolic capabilities, it could reveal important information regarding the ecological interactions it engages in, as well as its potential benefits or impacts on its surrounding environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella sikkimica
Strainstrain ERMR1:05

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella sikkimica strain ERMR1:05 plasmid unnamed2, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

217 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbBV494_RS14945Not AvailablePositive3230504 - 323179348197.3
trk system potassium transporter trkaBV494_RS14950Not AvailablePositive3231844 - 323322050344.7
large-conductance mechanosensitive channel protein msclBV494_RS14955Not AvailablePositive3233345 - 323376115210.1
alternative ribosome-rescue factor aBV494_RS14960Not AvailableNegative3233708 - 323399210963.3
zn(2+)-responsive transcriptional regulatorBV494_RS14965Not AvailableNegative3234093 - 323450915406.5
50s ribosomal protein l17BV494_RS14970Not AvailableNegative3234674 - 323506314592.7
dna-directed rna polymerase subunit alphaBV494_RS14975Not AvailableNegative3235104 - 323609336467.9
30s ribosomal protein s4BV494_RS14980Not AvailableNegative3236119 - 323673923530.6
30s ribosomal protein s11BV494_RS14985Not AvailableNegative3236772 - 323716113861.7
30s ribosomal protein s13BV494_RS14990Not AvailableNegative3237179 - 323753513263.3

Displaying genes 3231 – 3240 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.