Rahnella sikkimica strain ERMR1:05

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella sikkimica strain ERMR1:05 is a Gram-negative bacterium characterized by its possession of two replicons. The genomic information for this strain is available under the accessions NZ_CP019062.1 and NZ_CP019064.1. As a member of the genus Rahnella, this strain is likely to exhibit traits common to the group, such as being rod-shaped and possessing the capability to thrive in various environments. The presence of two replicons may indicate a complex genomic organization that can contribute to its adaptability and metabolic versatility. Understanding the genomic structure of Rahnella sikkimica strain ERMR1:05 could provide insights into its ecological roles and potential applications. For instance, the two replicons might facilitate the acquisition of traits beneficial for survival in diverse habitats, including the ability to utilize various substrates or resist environmental stressors. This adaptability can be significant in ecological niches where competition for resources is high. The study of strain ERMR1:05 could also shed light on the evolutionary mechanisms at play within the Rahnella genus. As researchers explore its genetic characteristics and metabolic capabilities, it could reveal important information regarding the ecological interactions it engages in, as well as its potential benefits or impacts on its surrounding environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella sikkimica
Strainstrain ERMR1:05

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella sikkimica strain ERMR1:05 plasmid unnamed2, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

217 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps assembly protein lptdBV494_RS13635Not AvailablePositive2945526 - 294790189519.8
peptidylprolyl isomerase suraBV494_RS13640Not AvailablePositive2947987 - 294928247424.5
4-hydroxythreonine-4-phosphate dehydrogenase pdxaBV494_RS13645Not AvailablePositive2949272 - 295027935659.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaBV494_RS13650Not AvailablePositive2950285 - 295111230903.4
co2+/mg2+ efflux protein apagBV494_RS13655Not AvailablePositive2951117 - 295149414193.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apahBV494_RS13660Not AvailablePositive2951500 - 295235431758.0
type 3 dihydrofolate reductaseBV494_RS13665Not AvailableNegative2952426 - 295291117998.3
lyse family translocatorBV494_RS13670Not AvailablePositive2953318 - 295393222199.0
glutathione-regulated potassium-efflux system protein kefcBV494_RS13675Not AvailableNegative2954007 - 295585766605.2
glutathione-regulated potassium-efflux system oxidoreductase keffBV494_RS13680Not AvailableNegative2955850 - 295640420813.8

Displaying genes 2971 – 2980 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.