Rahnella sikkimica strain ERMR1:05

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella sikkimica strain ERMR1:05 is a Gram-negative bacterium characterized by its possession of two replicons. The genomic information for this strain is available under the accessions NZ_CP019062.1 and NZ_CP019064.1. As a member of the genus Rahnella, this strain is likely to exhibit traits common to the group, such as being rod-shaped and possessing the capability to thrive in various environments. The presence of two replicons may indicate a complex genomic organization that can contribute to its adaptability and metabolic versatility. Understanding the genomic structure of Rahnella sikkimica strain ERMR1:05 could provide insights into its ecological roles and potential applications. For instance, the two replicons might facilitate the acquisition of traits beneficial for survival in diverse habitats, including the ability to utilize various substrates or resist environmental stressors. This adaptability can be significant in ecological niches where competition for resources is high. The study of strain ERMR1:05 could also shed light on the evolutionary mechanisms at play within the Rahnella genus. As researchers explore its genetic characteristics and metabolic capabilities, it could reveal important information regarding the ecological interactions it engages in, as well as its potential benefits or impacts on its surrounding environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella sikkimica
Strainstrain ERMR1:05

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella sikkimica strain ERMR1:05 plasmid unnamed2, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

217 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alginate lyase family proteinBV494_RS05120Not AvailablePositive1105095 - 110641749145.2
fe(3+)-hydroxamate abc transporter permease fhubBV494_RS05125Not AvailableNegative1106502 - 110842467431.7
abc transporter substrate-binding proteinBV494_RS05130Not AvailableNegative1108417 - 110933733086.1
tonb-dependent siderophore receptorBV494_RS05135Not AvailableNegative1109337 - 111168886036.4
fecr family proteinBV494_RS05140Not AvailableNegative1111818 - 111284938445.8
rna polymerase sigma factorBV494_RS05145Not AvailableNegative1112842 - 111343522771.0
pyruvate:ferredoxin (flavodoxin) oxidoreductaseBV494_RS05150Not AvailableNegative1113775 - 1117305128709.0
duf333 domain-containing proteinBV494_RS05155Not AvailablePositive1117615 - 11178969533.55
meta domain-containing proteinBV494_RS05160Not AvailableNegative1117932 - 111834815196.5
pirin family proteinBV494_RS05165Not AvailableNegative1118563 - 111928826530.9

Displaying genes 1371 – 1380 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.