Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | BE963_RS06385 | Not Available | Negative | 709376 - 710416 | 37264.0 |
| nad(p)h-binding protein | BE963_RS06390 | Not Available | Negative | 710489 - 711124 | 23211.4 |
| protein/nucleic acid deglycase | BE963_RS06395 | Not Available | Positive | 711252 - 711770 | 18859.4 |
| yhbp family protein | BE963_RS06400 | Not Available | Negative | 711750 - 712193 | 16764.2 |
| dna damage response exodeoxyribonuclease yhbq | BE963_RS06405 | Not Available | Positive | 712244 - 712546 | 11271.6 |
| gnat family n-acetyltransferase | BE963_RS06410 | Not Available | Negative | 712533 - 713036 | 18548.9 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | BE963_RS06415 | Not Available | Negative | 713030 - 713554 | 19644.9 |
| ubiquinone anaerobic biosynthesis protein ubiu | BE963_RS06420 | Not Available | Positive | 713763 - 714758 | 37035.2 |
| u32 family peptidase | BE963_RS06425 | Not Available | Positive | 714767 - 715645 | 32507.1 |
| luciferase-like monooxygenase | BE963_RS06430 | Not Available | Positive | 715726 - 716733 | 37145.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





