Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tdca | BE963_RS06230 | Not Available | Negative | 681873 - 682811 | 34540.9 |
| transcriptional activator tdcr | BE963_RS29505 | Not Available | Positive | 683126 - 683344 | 8529.12 |
| protein yhab | BE963_RS06240 | Not Available | Positive | 683600 - 684139 | 20576.6 |
| yhac family protein | BE963_RS06245 | Not Available | Positive | 684161 - 685348 | 45257.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 685576 - 685952 | Not Available |
| glycerate 2-kinase | BE963_RS06255 | Not Available | Negative | 685985 - 687130 | 39196.7 |
| 2-hydroxy-3-oxopropionate reductase | BE963_RS06260 | Not Available | Negative | 687227 - 688117 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | BE963_RS06265 | Not Available | Negative | 688147 - 688917 | 27400.6 |
| galactarate/glucarate/glycerate transporter garp | BE963_RS06270 | Not Available | Negative | 688933 - 690267 | 48982.1 |
| galactarate dehydratase | BE963_RS06275 | Not Available | Positive | 690642 - 692213 | 56410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





