Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | BE963_RS06180 | Not Available | Positive | 670066 - 670767 | 26001.0 |
| protein yhal | BE963_RS06185 | Not Available | Positive | 670790 - 670954 | 5921.0 |
| cysteine desulfidase | BE963_RS06190 | Not Available | Negative | 671087 - 672397 | 45334.8 |
| amino acid permease | BE963_RS06195 | Not Available | Negative | 672425 - 673756 | 48299.6 |
| l-serine ammonia-lyase | BE963_RS06200 | Not Available | Negative | 674031 - 675395 | 48466.5 |
| enamine/imine deaminase | BE963_RS06205 | Not Available | Negative | 675467 - 675856 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | BE963_RS06210 | Not Available | Negative | 675870 - 678164 | 85926.3 |
| propionate kinase | BE963_RS06215 | Not Available | Negative | 678198 - 679406 | 43362.6 |
| threonine/serine transporter tdcc | BE963_RS06220 | Not Available | Negative | 679432 - 680763 | 48895.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | BE963_RS06225 | Not Available | Negative | 680785 - 681774 | 35234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





