Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | BE963_RS06070 | Not Available | Positive | 652844 - 653830 | 36244.3 |
| terc family membrane protein alx | BE963_RS06075 | Not Available | Positive | 654113 - 655078 | 35969.1 |
| serine/threonine transporter sstt | BE963_RS06085 | Not Available | Positive | 655694 - 656938 | 43480.4 |
| ygjv family protein | BE963_RS06090 | Not Available | Negative | 656861 - 657493 | 23486.3 |
| altronate dehydratase | BE963_RS06095 | Not Available | Negative | 657576 - 659063 | 54127.1 |
| glucuronate isomerase | BE963_RS06100 | Not Available | Negative | 659078 - 660490 | 53990.1 |
| hexuronate transporter exut | BE963_RS06105 | Not Available | Positive | 660973 - 662271 | 46909.1 |
| transcriptional regulator exur | BE963_RS06110 | Not Available | Positive | 662401 - 663177 | 29821.3 |
| hypothetical protein | BE963_RS29500 | Not Available | Positive | 663417 - 663500 | 3277.06 |
| deda family general envelope maintenance protein yqja | BE963_RS06115 | Not Available | Positive | 663522 - 664184 | 24587.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





