Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase subunit beta | BE963_RS06015 | Not Available | Positive | 641518 - 641967 | 17457.6 |
| amino acid permease | BE963_RS06020 | Not Available | Positive | 642030 - 643463 | 52175.7 |
| protein ygjj | BE963_RS06025 | Not Available | Positive | 643597 - 644667 | 40115.5 |
| alpha-glucosidase | BE963_RS06030 | Not Available | Positive | 644684 - 647035 | 88363.7 |
| nadph-dependent 2,4-dienoyl-coa reductase | BE963_RS06035 | Not Available | Positive | 647206 - 649224 | 72646.6 |
| type ii toxin-antitoxin system antitoxin higa | BE963_RS06040 | Not Available | Negative | 649269 - 649685 | 14966.3 |
| type ii toxin-antitoxin system toxin higb | BE963_RS06045 | Not Available | Negative | 649682 - 649996 | 12103.7 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | BE963_RS06055 | Not Available | Negative | 650281 - 651417 | 42342.9 |
| m48 family metallopeptidase | BE963_RS06060 | Not Available | Positive | 651502 - 652005 | 19468.6 |
| vancomycin high temperature exclusion protein | BE963_RS06065 | Not Available | Positive | 652082 - 652765 | 25212.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





