Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | BE963_RS05950 | Not Available | Positive | 628903 - 630744 | 70211.2 |
| g/u mismatch-specific dna glycosylase | BE963_RS05955 | Not Available | Negative | 630823 - 631329 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 631454 - 631529 | Not Available |
| nadph-dependent ferric chelate reductase nfef | BE963_RS05965 | Not Available | Negative | 631583 - 632347 | 28920.1 |
| dna-binding transcriptional regulator nfer | BE963_RS05975 | Not Available | Positive | 632624 - 633247 | 23416.7 |
| aerotaxis sensor receptor aer | BE963_RS05980 | Not Available | Negative | 633352 - 634872 | 55089.0 |
| putrescine aminotransferase | BE963_RS05990 | Not Available | Positive | 635290 - 636669 | 49607.2 |
| pp_00616 | BE963_RS05995 | Not Available | Negative | 636711 - 637043 | Not Available |
| transcriptional regulator ebgr | BE963_RS06005 | Not Available | Positive | 637262 - 638245 | 36256.6 |
| beta-galactosidase subunit alpha | BE963_RS06010 | Not Available | Positive | 638429 - 641521 | 117878.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





