Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2623 family protein yghw | BE963_RS05570 | Not Available | Negative | 555751 - 556038 | 10962.1 |
| yghx family hydrolase | BE963_RS05575 | Not Available | Negative | 556157 - 557044 | 32600.6 |
| l-glyceraldehyde 3-phosphate reductase | BE963_RS05580 | Not Available | Positive | 557201 - 558241 | 38934.5 |
| tigr00645 family protein | BE963_RS05585 | Not Available | Negative | 558281 - 558775 | 18642.3 |
| nadp(+)-dependent aldehyde reductase | BE963_RS05590 | Not Available | Positive | 558966 - 559850 | 31489.8 |
| tonb system transport protein exbd | BE963_RS05595 | Not Available | Negative | 559889 - 560314 | 15527.9 |
| tol-pal system-associated acyl-coa thioesterase | BE963_RS05600 | Not Available | Negative | 560321 - 561055 | 26289.0 |
| cystathionine beta-lyase | BE963_RS05610 | Not Available | Positive | 561307 - 562494 | 43228.8 |
| deda family general envelope maintenance protein yghb | BE963_RS05615 | Not Available | Positive | 562634 - 563293 | 24101.3 |
| dna-binding transcriptional regulator yqhc | BE963_RS05620 | Not Available | Negative | 563333 - 564232 | 33817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





