Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glutathionylspermidine amidase/synthase | BE963_RS05515 | Not Available | Negative | 545855 - 547714 | 70522.7 |
| glutathione-dependent disulfide-bond oxidoreductase | BE963_RS05520 | Not Available | Positive | 547919 - 548785 | 32421.4 |
| hydrogenase maturation factor hybg | BE963_RS05525 | Not Available | Negative | 549017 - 549265 | 8808.67 |
| hydrogenase maturation nickel metallochaperone hypa | BE963_RS05530 | Not Available | Negative | 549278 - 549619 | 12724.2 |
| hydrogenase-2 assembly chaperone | BE963_RS05535 | Not Available | Negative | 549612 - 550100 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | BE963_RS05540 | Not Available | Negative | 550093 - 550587 | 17712.8 |
| hydrogenase 2 large subunit | BE963_RS05545 | Not Available | Negative | 550587 - 552290 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | BE963_RS05550 | Not Available | Negative | 552287 - 553465 | 43604.6 |
| hydrogenase 2 operon protein hyba | BE963_RS05555 | Not Available | Negative | 553455 - 554441 | 36014.0 |
| hydrogenase 2 small subunit | BE963_RS05560 | Not Available | Negative | 554444 - 555562 | 39654.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





