Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine palmitoyltransferase | BE963_RS05465 | Not Available | Positive | 535471 - 536643 | 41697.0 |
| hypothetical protein | BE963_RS05470 | Not Available | Negative | 536678 - 537757 | 39530.2 |
| lps export abc transporter permease lptf | BE963_RS05475 | Not Available | Negative | 537754 - 538824 | 39882.1 |
| ytfj family protein | BE963_RS05480 | Not Available | Negative | 538855 - 539415 | 20820.1 |
| hypothetical protein | BE963_RS05485 | Not Available | Negative | 539427 - 540251 | 32114.8 |
| lipopolysaccharide biosynthesis protein | BE963_RS05490 | Not Available | Negative | 540251 - 541600 | 48730.1 |
| hypothetical protein | BE963_RS05495 | Not Available | Negative | 541646 - 542404 | 28112.1 |
| dtmp kinase | BE963_RS05500 | Not Available | Negative | 542436 - 543149 | 26373.3 |
| dtmp kinase | BE963_RS05505 | Not Available | Positive | 543323 - 544015 | 25401.1 |
| inorganic phosphate transporter pitb | BE963_RS05510 | Not Available | Negative | 544064 - 545563 | 53842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





