Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gsph | BE963_RS05360 | Not Available | Negative | 508292 - 508855 | 21212.8 |
| type ii secretion system major pseudopilin gspg | BE963_RS05365 | Not Available | Negative | 508859 - 509314 | 16663.8 |
| type ii secretion system inner membrane protein gspf | BE963_RS05370 | Not Available | Negative | 509331 - 510554 | 44956.8 |
| type ii secretion system atpase gspe | BE963_RS05375 | Not Available | Negative | 510554 - 512047 | 55173.7 |
| type ii secretion system secretin gspd | BE963_RS05380 | Not Available | Negative | 512047 - 514107 | 74169.0 |
| type ii secretion system protein gspc | BE963_RS05385 | Not Available | Negative | 514137 - 515096 | 35749.3 |
| type ii secretion system pilot lipoprotein gsps-beta | BE963_RS05390 | Not Available | Negative | 515114 - 515524 | 14640.8 |
| prepilin peptidase pppa | BE963_RS05395 | Not Available | Negative | 515590 - 516399 | 29416.8 |
| lipoprotein metalloprotease ssle | BE963_RS05405 | Not Available | Negative | 516529 - 521091 | 167843.0 |
| glycolate permease glca | BE963_RS05415 | Not Available | Negative | 521577 - 523259 | 58923.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





