Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BE963_RS05310 | Not Available | Negative | 496317 - 496997 | 25702.0 |
| cdp-glycerol glycerophosphotransferase family protein | BE963_RS05315 | Not Available | Negative | 497169 - 500102 | 115022.0 |
| is1-like element is1b family transposase | BE963_RS05320 | Not Available | Negative | 500854 - 501551 | 26558.3 |
| galactosyltransferase-related protein | BE963_RS05325 | Not Available | Negative | 501711 - 502703 | 39272.2 |
| abc transporter permease | BE963_RS05330 | Not Available | Negative | 502803 - 503579 | 29593.4 |
| gspm family type ii secretion system protein yghd | BE963_RS05335 | Not Available | Negative | 504635 - 505171 | 20362.7 |
| type ii secretion system protein gspl | BE963_RS05340 | Not Available | Negative | 505173 - 506351 | 44284.5 |
| type ii secretion system minor pseudopilin gspk | BE963_RS05345 | Not Available | Negative | 506348 - 507325 | 36544.3 |
| type ii secretion system minor pseudopilin gspj | BE963_RS05350 | Not Available | Negative | 507322 - 507927 | 22429.4 |
| type ii secretion system minor pseudopilin gspi | BE963_RS05355 | Not Available | Negative | 507924 - 508295 | 13666.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





