Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfji family protein | BE963_RS05140 | Not Available | Negative | 462357 - 463847 | 56195.0 |
| gtpase family protein | BE963_RS05155 | Not Available | Positive | 465179 - 466051 | 32424.7 |
| autotransporter adhesin ag43 | BE963_RS05160 | Not Available | Positive | 466385 - 469504 | 106615.0 |
| hypothetical protein | BE963_RS05165 | Not Available | Positive | 469625 - 472141 | 91525.8 |
| irma family protein | BE963_RS05170 | Not Available | Positive | 472217 - 472672 | 16917.1 |
| duf905 family protein | BE963_RS28525 | Not Available | Positive | 472815 - 472904 | 3462.12 |
| duf932 domain-containing protein | BE963_RS05185 | Not Available | Positive | 473083 - 473904 | 31338.5 |
| antirestriction protein | BE963_RS05190 | Not Available | Positive | 474168 - 474641 | 17876.1 |
| jab domain-containing protein | BE963_RS05195 | Not Available | Positive | 474657 - 475133 | 17636.3 |
| duf987 domain-containing protein | BE963_RS05200 | Not Available | Positive | 475196 - 475417 | 8441.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





