Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator argp | BE963_RS04385 | Not Available | Positive | 333347 - 334240 | 33473.6 |
| methylmalonyl-coa mutase | BE963_RS04395 | Not Available | Positive | 334444 - 336588 | 77793.6 |
| methylmalonyl co-a mutase-associated gtpase meab | BE963_RS04400 | Not Available | Positive | 336581 - 337576 | 36660.1 |
| methylmalonyl-coa decarboxylase | BE963_RS04405 | Not Available | Positive | 337587 - 338372 | 29174.3 |
| propionyl-coa:succinate coa transferase | BE963_RS04410 | Not Available | Positive | 338396 - 339874 | 53872.6 |
| lysr family transcriptional regulator srsr | BE963_RS04415 | Not Available | Negative | 339871 - 340767 | 34675.7 |
| oxidative stress defense protein | BE963_RS04420 | Not Available | Negative | 340935 - 341675 | 26636.7 |
| arginine exporter argo | BE963_RS04425 | Not Available | Negative | 341768 - 342403 | 23141.0 |
| c4-dicarboxylate trap transporter substrate-binding protein | BE963_RS04430 | Not Available | Positive | 342519 - 343562 | 39453.3 |
| small-conductance mechanosensitive channel mscs | BE963_RS04435 | Not Available | Negative | 343604 - 344479 | 31554.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





