Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ygfx | BE963_RS04275 | Not Available | Negative | 315066 - 315473 | 16095.0 |
| fad assembly factor sdhe | BE963_RS04280 | Not Available | Negative | 315454 - 315720 | 10547.7 |
| pp_00304 | BE963_RS04285 | Not Available | Positive | 315963 - 316943 | Not Available |
| paqr family membrane homeostasis protein trha | BE963_RS04290 | Not Available | Negative | 317020 - 317679 | 23848.2 |
| n(4)-acetylcytidine aminohydrolase | BE963_RS04295 | Not Available | Negative | 317843 - 318154 | 11906.0 |
| 6-phospho-beta-glucosidase bgla | BE963_RS04300 | Not Available | Positive | 318199 - 319632 | 55223.4 |
| aminomethyl-transferring glycine dehydrogenase | BE963_RS04305 | Not Available | Negative | 319796 - 322669 | 104340.0 |
| glycine cleavage system protein gcvh | BE963_RS04310 | Not Available | Negative | 322788 - 323177 | 13811.8 |
| glycine cleavage system aminomethyltransferase gcvt | BE963_RS04315 | Not Available | Negative | 323201 - 324295 | 40107.0 |
| hypothetical protein | BE963_RS29115 | Not Available | Positive | 324586 - 324669 | 3232.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





