Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system atpase sctn | BE963_RS04070 | Not Available | Negative | 264228 - 265520 | 47612.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | BE963_RS04075 | Not Available | Negative | 265552 - 267612 | 76362.5 |
| yopn/lcre/inve/mxic type iii secretion system gatekeeper | BE963_RS04080 | Not Available | Negative | 267605 - 268750 | 43506.6 |
| type iii secretion system outer membrane ring subunit sctc | BE963_RS04085 | Not Available | Negative | 268755 - 270458 | 62720.4 |
| helix-turn-helix domain-containing protein | BE963_RS04090 | Not Available | Negative | 270455 - 271204 | 28286.4 |
| ghot/ortt family toxin | BE963_RS04095 | Not Available | Negative | 271550 - 271729 | 6628.51 |
| glycoside hydrolase family 15 protein | BE963_RS04100 | Not Available | Negative | 271795 - 273405 | 60458.6 |
| Trna-gly | Not Available | Not Available | Positive | 273638 - 273711 | Not Available |
| amidase activator acts | BE963_RS04110 | Not Available | Negative | 273790 - 274542 | 26466.9 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | BE963_RS04120 | Not Available | Positive | 274958 - 277255 | 82658.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





