Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 73969 - 73981 | Not Available |
| Non-functional integrase | BE963_RS01170 | Not Available | Negative | 74193 - 74975 | 28734.0 |
| conjugal transfer pilus assembly protein trah | BE963_RS00675 | Not Available | Negative | 1 - 1380 | 50652.9 |
| f-type conjugal transfer protein trbf | BE963_RS00680 | Not Available | Negative | 1358 - 1801 | 16986.0 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | BE963_RS00685 | Not Available | Negative | 1847 - 2404 | 20016.0 |
| type-f conjugative transfer system pilin chaperone traq | BE963_RS00690 | Not Available | Negative | 2376 - 2615 | 8914.02 |
| type-f conjugative transfer system pilin assembly protein traf | BE963_RS00695 | Not Available | Negative | 2626 - 3378 | 28311.0 |
| hypothetical protein | BE963_RS00700 | Not Available | Negative | 3399 - 3725 | 12666.2 |
| hypothetical protein | BE963_RS00705 | Not Available | Negative | 3738 - 3986 | 9419.58 |
| conjugal transfer protein trbe | BE963_RS00710 | Not Available | Negative | 3964 - 4218 | 9588.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





