Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain Ecol_316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain Ecol_316 chromosome, complete genome.
Gene Summary
Adenine Count
1247934 bp
Thymine Count
1247604 bp
Guanine Count
1276239 bp
Cytosine Count
1284295 bp
Genome Length
5056072 bp
Protein-coding Genes
4484 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BE963_RS03910 | Not Available | Negative | 242011 - 242847 | 31110.2 |
| acetyl-coa c-acetyltransferase | BE963_RS03915 | Not Available | Negative | 243135 - 244316 | 41055.2 |
| amino acid permease | BE963_RS03920 | Not Available | Positive | 244571 - 245800 | 45116.0 |
| helix-turn-helix transcriptional regulator | BE963_RS03925 | Not Available | Positive | 246260 - 246892 | 24387.3 |
| winged helix-turn-helix domain-containing protein | BE963_RS03930 | Not Available | Positive | 247226 - 248035 | 30794.7 |
| protein yqej | BE963_RS03935 | Not Available | Positive | 248028 - 248510 | 18733.6 |
| hypothetical protein | BE963_RS03940 | Not Available | Negative | 248543 - 248623 | 3248.9 |
| protein yqek | BE963_RS03945 | Not Available | Negative | 248659 - 249084 | 16229.4 |
| hypothetical protein | BE963_RS03960 | Not Available | Positive | 249514 - 250005 | 18676.8 |
| tetratricopeptide repeat protein | BE963_RS03965 | Not Available | Positive | 250231 - 250722 | 18953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





